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Abstract This paper presents a deep learning method for solving an improved one-dimensional Poisson–Nernst–Planck ion channel (PNPic) model, called the PNPic deep learning solver. The solver combines a novel local neural network, adapted from the neural network with local converging inputs, with an efficient PNPic finite element solver, developed in this work. In particular, the local neural network is extended to handle the complexities of the PNPic model—a system of nonlinear convection–diffusion and elliptic equations with multiple subdomains connected by interface conditions. The PNPic finite element solver efficiently generates input and reference datasets for fast training the local neural network, as well as input datasets for quickly predicting PNPic solutions with high accuracy for a family of PNPic models. Initial numerical tests, involving perturbations of model parameters and interface locations, demonstrate that the PNPic deep learning solver can generate highly accurate numerical solutions.